Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX473886: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-320490' containing sample 'TB_RSA196' from individual '11157/2'
2 ILLUMINA (Illumina HiSeq 2000) runs: 10.3M spots, 2.1G bases, 1.1Gb downloads

UUID: ff5c590d-1d69-4268-aa76-b348cbf26349

Design: Illumina sequencing of Mycobacterium tuberculosis TB_RSA196 via random selection

Submitted by: Broad Institute (BI)

Study: TB-ARC - MRC SA

PRJNA228189 • SRP036924 • All experiments • All runs

Sample: Generic sample from Mycobacterium tuberculosis TB_RSA196

SAMN02403635 • SRS555269 • All experiments • All runs

Organism: Mycobacterium tuberculosis TB_RSA196

Library:

Name: Pond-320490

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 12 attributes...) (hide...)

analysis_type: AssemblyWithReference

gssr_id: 453872.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5819J

material_type: DNA:DNA Somatic

product_order: PDO-2551

product_part_number: P-MCV-0001

project: G54403

research_project: RP-114

root_sample_id: SM-4M8WL

sample_id: SM-5819J

work_request: 39310

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-06 13:50:38.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 10.3M spots, 2.1G bases, 1.1Gb

Run	# of Spots	# of Bases	Size	Published
SRR1173537	5,149,282	1G	568.5Mb	2014-02-20
SRR1173819	5,170,125	1G	571.6Mb	2014-02-20

ID:: 654376

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